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TaxoTagger

TaxoTagger is an open-source Python library for DNA taxonomy identification, which involves categorizing DNA sequences into their respective taxonomic groups. It is powered by deep learning and semantic search to provide efficient and accurate results.

Key Features

  • 🚀 Build vector databases from DNA sequences with ease
  • ⚡ Conduct efficient semantic searches for precise results
  • 🛠 Extend support for custom embedding models effortlessly
  • 🌐 Interact seamlessly through a user-friendly web app

Webapp Demo

Try the webapp demo at http://mycoai.org.

webapp

Citation

Citation

If you use TaxoTagger and/or its webapp in your work, please cite it as follows:

@software{Geng_TaxoTagger,
author = {Geng, Cunliang},
license = {Apache-2.0},
title = {{TaxoTagger}},
url = {https://github.com/MycoAI/taxotagger},
version = {0.0.1-alpha.6}
}
Or check the CITATION file in the repo for more details.